Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4S1Q9Y587 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 AL162377.1-201ENST00000618844 1793 ntBASIC19.68■□□□□ 0.74
AP4S1Q9Y587 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 AC133637.1-201ENST00000624115 1537 ntBASIC19.68■□□□□ 0.74
AP4S1Q9Y587 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 AL451085.2-201ENST00000605085 799 ntBASIC19.68■□□□□ 0.74
AP4S1Q9Y587 SMG8-203ENST00000578922 2178 ntBASIC19.68■□□□□ 0.74
AP4S1Q9Y587 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.68■□□□□ 0.74
AP4S1Q9Y587 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.67■□□□□ 0.74
AP4S1Q9Y587 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 AC103834.1-201ENST00000520383 144 ntBASIC19.67■□□□□ 0.74
AP4S1Q9Y587 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 Z92544.1-202ENST00000571933 1220 ntBASIC19.67■□□□□ 0.74
AP4S1Q9Y587 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP4S1Q9Y587 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 AL512408.1-201ENST00000569378 2000 ntBASIC19.66■□□□□ 0.74
AP4S1Q9Y587 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP4S1Q9Y587 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
AP4S1Q9Y587 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP4S1Q9Y587 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP4S1Q9Y587 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP4S1Q9Y587 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4S1Q9Y587 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4S1Q9Y587 AC087239.1-201ENST00000622671 572 ntBASIC19.64■□□□□ 0.73
AP4S1Q9Y587 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP4S1Q9Y587 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP4S1Q9Y587 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms