Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 AFG3L1P-217ENST00000557444 2447 ntBASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGB4Q9UN71 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 BX842568.3-201ENST00000418104 571 ntBASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGB4Q9UN71 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 PCDHAC2-203ENST00000615316 3011 ntBASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 UNC93B3-201ENST00000308076 687 ntBASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGB4Q9UN71 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGB4Q9UN71 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB4Q9UN71 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB4Q9UN71 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PCDHGB4Q9UN71 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB4Q9UN71 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB4Q9UN71 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PCDHGB4Q9UN71 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB4Q9UN71 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGB4Q9UN71 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PCDHGB4Q9UN71 AC131212.1-201ENST00000613771 668 ntBASIC20.08■□□□□ 0.81
PCDHGB4Q9UN71 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGB4Q9UN71 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
PCDHGB4Q9UN71 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PCDHGB4Q9UN71 AC003102.1-202ENST00000563394 1796 ntBASIC20.08■□□□□ 0.8
PCDHGB4Q9UN71 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGB4Q9UN71 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGB4Q9UN71 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDHGB4Q9UN71 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGB4Q9UN71 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 AC126544.1-201ENST00000580842 1059 ntBASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 MIR4767-201ENST00000582827 78 ntBASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 AC233992.3-201ENST00000607491 485 ntBASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHGB4Q9UN71 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms