Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 AC074183.2-201ENST00000623112 922 ntBASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD3Q9UBI1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 AL499627.2-201ENST00000606283 725 ntBASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 SMG8-203ENST00000578922 2178 ntBASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD3Q9UBI1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
COMMD3Q9UBI1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 AC003102.1-202ENST00000563394 1796 ntBASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.28■□□□□ 0.52
COMMD3Q9UBI1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD3Q9UBI1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD3Q9UBI1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD3Q9UBI1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD3Q9UBI1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.27■□□□□ 0.52
COMMD3Q9UBI1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD3Q9UBI1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.27■□□□□ 0.52
COMMD3Q9UBI1 AC010980.1-201ENST00000587192 1142 ntBASIC18.27■□□□□ 0.52
COMMD3Q9UBI1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
COMMD3Q9UBI1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.27■□□□□ 0.52
COMMD3Q9UBI1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.27■□□□□ 0.51
COMMD3Q9UBI1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COMMD3Q9UBI1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.27■□□□□ 0.51
COMMD3Q9UBI1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COMMD3Q9UBI1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.27■□□□□ 0.51
COMMD3Q9UBI1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD3Q9UBI1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms