Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 AL050303.2-201ENST00000619798 666 ntBASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPHK1Q9NYA1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 AC005181.1-201ENST00000604782 1256 ntBASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 AC243732.1-201ENST00000612648 864 ntBASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.12■□□□□ 0.81
SPHK1Q9NYA1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 AC068338.2-201ENST00000563278 1430 ntBASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 AC006970.2-201ENST00000450065 779 ntBASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 AC245052.3-201ENST00000450182 901 ntBASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.11■□□□□ 0.81
SPHK1Q9NYA1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 AC007322.4-201ENST00000509611 723 ntBASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SPHK1Q9NYA1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 AC091799.1-201ENST00000422823 811 ntBASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.09■□□□□ 0.81
SPHK1Q9NYA1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.08■□□□□ 0.81
SPHK1Q9NYA1 AL024507.2-201ENST00000606070 2574 ntBASIC20.08■□□□□ 0.81
SPHK1Q9NYA1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPHK1Q9NYA1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPHK1Q9NYA1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.08■□□□□ 0.81
SPHK1Q9NYA1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPHK1Q9NYA1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.08■□□□□ 0.81
SPHK1Q9NYA1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SPHK1Q9NYA1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPHK1Q9NYA1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPHK1Q9NYA1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPHK1Q9NYA1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SPHK1Q9NYA1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms