Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 AC027682.1-201ENST00000562846 899 ntBASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 AC005837.3-201ENST00000612163 286 ntBASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCF3Q9NUQ8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCF3Q9NUQ8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.08■□□□□ 0.97
ABCF3Q9NUQ8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
ABCF3Q9NUQ8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCF3Q9NUQ8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCF3Q9NUQ8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.08■□□□□ 0.97
ABCF3Q9NUQ8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCF3Q9NUQ8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ABCF3Q9NUQ8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCF3Q9NUQ8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ABCF3Q9NUQ8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.08■□□□□ 0.96
ABCF3Q9NUQ8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ABCF3Q9NUQ8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
ABCF3Q9NUQ8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ABCF3Q9NUQ8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.08■□□□□ 0.96
ABCF3Q9NUQ8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.08■□□□□ 0.96
ABCF3Q9NUQ8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 MIR638-201ENST00000385237 100 ntBASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 AC010141.3-201ENST00000456659 717 ntBASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 AL031432.3-201ENST00000607698 485 ntBASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCF3Q9NUQ8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 TSPY26P-201ENST00000476365 1326 ntBASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 AC087289.5-201ENST00000586076 3175 ntBASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 MIR939-201ENST00000401314 82 ntBASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 AL136967.2-201ENST00000623968 743 ntBASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 AC068587.7-201ENST00000641602 218 ntBASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCF3Q9NUQ8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ABCF3Q9NUQ8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms