Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDC42SE2Q9NRR3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.33□□□□□ -0.11
CDC42SE2Q9NRR3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDC42SE2Q9NRR3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.33□□□□□ -0.11
CDC42SE2Q9NRR3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.33□□□□□ -0.11
CDC42SE2Q9NRR3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 AC131281.2-201ENST00000520478 145 ntBASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 AC007225.1-201ENST00000566331 1836 ntBASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 AL121603.2-201ENST00000557373 2117 ntBASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDC42SE2Q9NRR3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 AC233992.3-201ENST00000607491 485 ntBASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 AC055733.4-201ENST00000638462 1354 ntBASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.32□□□□□ -0.12
CDC42SE2Q9NRR3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 AC126544.1-201ENST00000580842 1059 ntBASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 AC027702.1-201ENST00000563810 1770 ntBASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDC42SE2Q9NRR3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms