Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.36■□□□□ 0.85
SEMA4BQ9NPR2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.36■□□□□ 0.85
SEMA4BQ9NPR2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SEMA4BQ9NPR2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.36■□□□□ 0.85
SEMA4BQ9NPR2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SEMA4BQ9NPR2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.36■□□□□ 0.85
SEMA4BQ9NPR2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA4BQ9NPR2 AC006128.1-201ENST00000624704 1661 ntBASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 LINC01521-201ENST00000504184 1943 ntBASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 AC012414.1-201ENST00000556676 535 ntBASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 FEM1AP1-201ENST00000431297 1995 ntBASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA4BQ9NPR2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA4BQ9NPR2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 AC105265.2-201ENST00000467189 838 ntBASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.33■□□□□ 0.85
SEMA4BQ9NPR2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SEMA4BQ9NPR2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEMA4BQ9NPR2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SEMA4BQ9NPR2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEMA4BQ9NPR2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.32■□□□□ 0.84
SEMA4BQ9NPR2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 AC121338.2-201ENST00000622535 1744 ntBASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 AC092667.1-201ENST00000434301 2586 ntBASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.31■□□□□ 0.84
SEMA4BQ9NPR2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SEMA4BQ9NPR2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms