Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.78■■□□□ 1.08
CD248Q9HCU0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD248Q9HCU0 AL050303.2-201ENST00000619798 666 ntBASIC21.78■■□□□ 1.08
CD248Q9HCU0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD248Q9HCU0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD248Q9HCU0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD248Q9HCU0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.78■■□□□ 1.08
CD248Q9HCU0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD248Q9HCU0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.77■■□□□ 1.08
CD248Q9HCU0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.77■■□□□ 1.08
CD248Q9HCU0 AC079089.2-201ENST00000531211 1277 ntBASIC21.77■■□□□ 1.08
CD248Q9HCU0 DUX4L16-201ENST00000555130 1264 ntBASIC21.77■■□□□ 1.08
CD248Q9HCU0 AL109923.1-201ENST00000618799 583 ntBASIC21.77■■□□□ 1.08
CD248Q9HCU0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CD248Q9HCU0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CD248Q9HCU0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.77■■□□□ 1.08
CD248Q9HCU0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD248Q9HCU0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.77■■□□□ 1.07
CD248Q9HCU0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD248Q9HCU0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.76■■□□□ 1.07
CD248Q9HCU0 AC092053.2-201ENST00000640557 1818 ntBASIC21.76■■□□□ 1.07
CD248Q9HCU0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD248Q9HCU0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD248Q9HCU0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.76■■□□□ 1.07
CD248Q9HCU0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.76■■□□□ 1.07
CD248Q9HCU0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD248Q9HCU0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD248Q9HCU0 AC139530.1-201ENST00000575312 1977 ntBASIC21.76■■□□□ 1.07
CD248Q9HCU0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CD248Q9HCU0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.75■■□□□ 1.07
CD248Q9HCU0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CD248Q9HCU0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CD248Q9HCU0 LINC01960-201ENST00000563759 1884 ntBASIC21.75■■□□□ 1.07
CD248Q9HCU0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CD248Q9HCU0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CD248Q9HCU0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD248Q9HCU0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD248Q9HCU0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.75■■□□□ 1.07
CD248Q9HCU0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CD248Q9HCU0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.75■■□□□ 1.07
CD248Q9HCU0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.75■■□□□ 1.07
CD248Q9HCU0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD248Q9HCU0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.75■■□□□ 1.07
CD248Q9HCU0 UBE2DNL-204ENST00000602536 740 ntBASIC21.75■■□□□ 1.07
CD248Q9HCU0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.75■■□□□ 1.07
CD248Q9HCU0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CD248Q9HCU0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD248Q9HCU0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CD248Q9HCU0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.75■■□□□ 1.07
CD248Q9HCU0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.74■■□□□ 1.07
CD248Q9HCU0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD248Q9HCU0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.74■■□□□ 1.07
CD248Q9HCU0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD248Q9HCU0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD248Q9HCU0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD248Q9HCU0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CD248Q9HCU0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.74■■□□□ 1.07
CD248Q9HCU0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD248Q9HCU0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CD248Q9HCU0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD248Q9HCU0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD248Q9HCU0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.74■■□□□ 1.07
CD248Q9HCU0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.74■■□□□ 1.07
CD248Q9HCU0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.74■■□□□ 1.07
CD248Q9HCU0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD248Q9HCU0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CD248Q9HCU0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD248Q9HCU0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD248Q9HCU0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD248Q9HCU0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.73■■□□□ 1.07
CD248Q9HCU0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD248Q9HCU0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD248Q9HCU0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD248Q9HCU0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.73■■□□□ 1.07
CD248Q9HCU0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD248Q9HCU0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.73■■□□□ 1.07
CD248Q9HCU0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.73■■□□□ 1.07
CD248Q9HCU0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CD248Q9HCU0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CD248Q9HCU0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CD248Q9HCU0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CD248Q9HCU0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CD248Q9HCU0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CD248Q9HCU0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CD248Q9HCU0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.72■■□□□ 1.07
CD248Q9HCU0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CD248Q9HCU0 AC142086.2-201ENST00000569753 217 ntBASIC21.72■■□□□ 1.07
CD248Q9HCU0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms