Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD8Q9HCK8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD8Q9HCK8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 SLC25A3P1-201ENST00000443844 931 ntBASIC19.7■□□□□ 0.74
CHD8Q9HCK8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 AP000593.1-201ENST00000393668 712 ntBASIC19.7■□□□□ 0.74
CHD8Q9HCK8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.7■□□□□ 0.74
CHD8Q9HCK8 AC023511.2-201ENST00000618803 211 ntBASIC19.7■□□□□ 0.74
CHD8Q9HCK8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 RBM17P1-201ENST00000453646 1190 ntBASIC19.69■□□□□ 0.74
CHD8Q9HCK8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 AC006538.3-201ENST00000612495 578 ntBASIC19.69■□□□□ 0.74
CHD8Q9HCK8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHD8Q9HCK8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 AL355355.2-201ENST00000442321 338 ntBASIC19.68■□□□□ 0.74
CHD8Q9HCK8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHD8Q9HCK8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 AF186192.3-201ENST00000583427 947 ntBASIC19.67■□□□□ 0.74
CHD8Q9HCK8 AL031963.3-201ENST00000606441 850 ntBASIC19.67■□□□□ 0.74
CHD8Q9HCK8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.67■□□□□ 0.74
CHD8Q9HCK8 CYP2D8P-201ENST00000433633 1490 ntBASIC19.67■□□□□ 0.74
CHD8Q9HCK8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 BX664615.1-201ENST00000443558 458 ntBASIC19.66■□□□□ 0.74
CHD8Q9HCK8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 AC053503.5-201ENST00000601508 636 ntBASIC19.66■□□□□ 0.74
CHD8Q9HCK8 AC010947.1-201ENST00000623454 693 ntBASIC19.66■□□□□ 0.74
CHD8Q9HCK8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CHD8Q9HCK8 AC105020.6-201ENST00000621523 1217 ntBASIC19.66■□□□□ 0.74
CHD8Q9HCK8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms