Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.92□□□□□ -0.18
SND1-IT1Q9HBX3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 AC133637.1-201ENST00000624115 1537 ntBASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 Z92544.1-202ENST00000571933 1220 ntBASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 AL451085.2-201ENST00000605085 799 ntBASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 AL117332.1-201ENST00000622628 974 ntBASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.91□□□□□ -0.18
SND1-IT1Q9HBX3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 MIR4787-201ENST00000607364 84 ntBASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 AFG3L1P-217ENST00000557444 2447 ntBASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.9□□□□□ -0.18
SND1-IT1Q9HBX3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC13.9□□□□□ -0.19
SND1-IT1Q9HBX3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 AC073314.1-201ENST00000568729 2216 ntBASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 AC068587.7-201ENST00000641602 218 ntBASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms