Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.65■■□□□ 1.54
RNF41Q9H4P4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF41Q9H4P4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF41Q9H4P4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RNF41Q9H4P4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF41Q9H4P4 AC007322.1-201ENST00000426983 750 ntBASIC24.64■■□□□ 1.54
RNF41Q9H4P4 CNN2P6-201ENST00000439038 900 ntBASIC24.64■■□□□ 1.54
RNF41Q9H4P4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.64■■□□□ 1.54
RNF41Q9H4P4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF41Q9H4P4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF41Q9H4P4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.64■■□□□ 1.53
RNF41Q9H4P4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF41Q9H4P4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 AC026185.1-201ENST00000445748 174 ntBASIC24.63■■□□□ 1.53
RNF41Q9H4P4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 RAP2CP1-201ENST00000605103 478 ntBASIC24.63■■□□□ 1.53
RNF41Q9H4P4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF41Q9H4P4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
RNF41Q9H4P4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF41Q9H4P4 AL024507.2-201ENST00000606070 2574 ntBASIC24.6■■□□□ 1.53
RNF41Q9H4P4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 AC091799.1-201ENST00000422823 811 ntBASIC24.6■■□□□ 1.53
RNF41Q9H4P4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RNF41Q9H4P4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF41Q9H4P4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.59■■□□□ 1.53
RNF41Q9H4P4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF41Q9H4P4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF41Q9H4P4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RNF41Q9H4P4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
RNF41Q9H4P4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF41Q9H4P4 FEM1AP4-201ENST00000443167 1987 ntBASIC24.59■■□□□ 1.53
RNF41Q9H4P4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.59■■□□□ 1.53
RNF41Q9H4P4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF41Q9H4P4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF41Q9H4P4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
RNF41Q9H4P4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RNF41Q9H4P4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
RNF41Q9H4P4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF41Q9H4P4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
RNF41Q9H4P4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
RNF41Q9H4P4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.58■■□□□ 1.53
RNF41Q9H4P4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.58■■□□□ 1.53
RNF41Q9H4P4 AL162412.1-201ENST00000567129 965 ntBASIC24.58■■□□□ 1.53
RNF41Q9H4P4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.58■■□□□ 1.53
RNF41Q9H4P4 AL591742.1-201ENST00000604433 565 ntBASIC24.58■■□□□ 1.53
RNF41Q9H4P4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
RNF41Q9H4P4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
RNF41Q9H4P4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms