Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 AC010141.2-201ENST00000452426 721 ntBASIC19.29■□□□□ 0.68
UBQLN3Q9H347 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 AP001160.3-201ENST00000601484 763 ntBASIC19.29■□□□□ 0.68
UBQLN3Q9H347 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UBQLN3Q9H347 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN3Q9H347 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 AC090192.1-201ENST00000517740 490 ntBASIC19.27■□□□□ 0.68
UBQLN3Q9H347 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.27■□□□□ 0.68
UBQLN3Q9H347 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
UBQLN3Q9H347 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBQLN3Q9H347 AC003102.1-202ENST00000563394 1796 ntBASIC19.27■□□□□ 0.67
UBQLN3Q9H347 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 BID-214ENST00000617586 542 ntTSL 5 BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.26■□□□□ 0.67
UBQLN3Q9H347 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 AC080038.1-201ENST00000611274 1154 ntBASIC19.25■□□□□ 0.67
UBQLN3Q9H347 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN3Q9H347 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN3Q9H347 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms