Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COMMD4Q9H0A8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.35■□□□□ 0.53
COMMD4Q9H0A8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 AP005212.1-201ENST00000581547 1997 ntBASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 PLK5-205ENST00000642079 1969 ntBASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COMMD4Q9H0A8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
COMMD4Q9H0A8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD4Q9H0A8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD4Q9H0A8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD4Q9H0A8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD4Q9H0A8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COMMD4Q9H0A8 AC121338.2-201ENST00000622535 1744 ntBASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 AC092667.1-201ENST00000434301 2586 ntBASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COMMD4Q9H0A8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 SMUG1P1-201ENST00000590640 811 ntBASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.32■□□□□ 0.52
COMMD4Q9H0A8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 MIR4466-201ENST00000606121 54 ntBASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms