Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP4-4Q9BYR3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP4-4Q9BYR3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP4-4Q9BYR3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KRTAP4-4Q9BYR3 PIN4-201ENST00000218432 1780 ntTSL 2 BASIC4.34□□□□□ -1.71
KRTAP4-4Q9BYR3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KRTAP4-4Q9BYR3 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
KRTAP4-4Q9BYR3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP4-4Q9BYR3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP4-4Q9BYR3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP4-4Q9BYR3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP4-4Q9BYR3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC4.34□□□□□ -1.72
KRTAP4-4Q9BYR3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 COX16-201ENST00000389912 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 THAP5-201ENST00000313516 1568 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC006210.2-201ENST00000367074 1545 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 CR382285.2-201ENST00000624662 1495 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 ZCCHC9-202ENST00000380199 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RNU6-1320P-201ENST00000390838 107 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RNU6-1269P-201ENST00000391139 107 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 GTF2IP5-201ENST00000414608 731 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 LINC02087-201ENST00000418821 951 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 MTND2P16-201ENST00000419987 799 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 ATP5HP2-201ENST00000433885 485 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC091862.1-201ENST00000438016 1100 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 ZNF101-204ENST00000444249 1152 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 MTND2P8-201ENST00000450555 1025 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RAB28P2-201ENST00000454299 641 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RNU6-599P-201ENST00000459383 107 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RNU6-1193P-201ENST00000459461 107 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC009299.2-201ENST00000482477 511 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC005351.1-201ENST00000511152 786 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC009800.1-201ENST00000511357 1006 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RN7SKP157-201ENST00000516174 282 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RNU6-415P-201ENST00000516252 97 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC091163.3-201ENST00000518269 1144 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC127537.3-201ENST00000566532 749 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 MIR3960-201ENST00000583311 91 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 GMCL1P2-201ENST00000605230 823 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AL513477.2-201ENST00000607858 568 ntBASIC4.33□□□□□ -1.72
KRTAP4-4Q9BYR3 AC027449.1-201ENST00000608890 407 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms