Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF1Q9BSM1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 UBE2DNL-204ENST00000602536 740 ntBASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 AC073111.5-205ENST00000641717 521 ntBASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 AC092667.1-201ENST00000434301 2586 ntBASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCGF1Q9BSM1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCGF1Q9BSM1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCGF1Q9BSM1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCGF1Q9BSM1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 AC010141.2-201ENST00000452426 721 ntBASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 AC138907.5-202ENST00000569484 235 ntBASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCGF1Q9BSM1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 AC053503.5-201ENST00000601508 636 ntBASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCGF1Q9BSM1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 CDCA4P2-201ENST00000441182 718 ntBASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 AC026185.1-201ENST00000445748 174 ntBASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 EEF1DP3-203ENST00000566025 782 ntBASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCGF1Q9BSM1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms