Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 AC024257.2-201ENST00000549699 147 ntBASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 AC233992.3-201ENST00000607491 485 ntBASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 AC121338.2-201ENST00000622535 1744 ntBASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 AC027702.1-201ENST00000563810 1770 ntBASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HDHD3Q9BSH5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 AC055733.4-201ENST00000638462 1354 ntBASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 IGHV3-19-201ENST00000521488 291 ntBASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HDHD3Q9BSH5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 AL136162.1-201ENST00000607711 1078 ntBASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HDHD3Q9BSH5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HDHD3Q9BSH5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms