Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40CQ96S21 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
RAB40CQ96S21 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB40CQ96S21 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40CQ96S21 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40CQ96S21 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB40CQ96S21 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB40CQ96S21 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40CQ96S21 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40CQ96S21 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB40CQ96S21 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40CQ96S21 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40CQ96S21 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RAB40CQ96S21 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB40CQ96S21 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB40CQ96S21 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RAB40CQ96S21 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
RAB40CQ96S21 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB40CQ96S21 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
RAB40CQ96S21 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB40CQ96S21 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB40CQ96S21 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 AC007225.1-201ENST00000566331 1836 ntBASIC16.86■□□□□ 0.29
RAB40CQ96S21 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB40CQ96S21 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40CQ96S21 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 AL391422.3-201ENST00000603791 2761 ntBASIC16.85■□□□□ 0.29
RAB40CQ96S21 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 AFG3L1P-217ENST00000557444 2447 ntBASIC16.85■□□□□ 0.29
RAB40CQ96S21 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40CQ96S21 AC006455.2-201ENST00000429931 906 ntBASIC16.85■□□□□ 0.29
RAB40CQ96S21 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40CQ96S21 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40CQ96S21 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40CQ96S21 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB40CQ96S21 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB40CQ96S21 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40CQ96S21 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40CQ96S21 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
RAB40CQ96S21 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40CQ96S21 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40CQ96S21 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40CQ96S21 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40CQ96S21 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40CQ96S21 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40CQ96S21 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40CQ96S21 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40CQ96S21 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40CQ96S21 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40CQ96S21 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40CQ96S21 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB40CQ96S21 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40CQ96S21 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB40CQ96S21 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB40CQ96S21 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
RAB40CQ96S21 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB40CQ96S21 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB40CQ96S21 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
RAB40CQ96S21 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40CQ96S21 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
RAB40CQ96S21 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40CQ96S21 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40CQ96S21 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RAB40CQ96S21 UNC93B8-201ENST00000511903 705 ntBASIC16.83■□□□□ 0.28
RAB40CQ96S21 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB40CQ96S21 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40CQ96S21 AP006587.3-201ENST00000525742 1516 ntBASIC16.83■□□□□ 0.28
RAB40CQ96S21 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB40CQ96S21 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40CQ96S21 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.83■□□□□ 0.28
RAB40CQ96S21 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RAB40CQ96S21 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RAB40CQ96S21 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
RAB40CQ96S21 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RAB40CQ96S21 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40CQ96S21 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB40CQ96S21 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40CQ96S21 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms