Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXN4Q96NZ1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXN4Q96NZ1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 AL354811.1-201ENST00000610286 706 ntBASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXN4Q96NZ1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 AC027612.3-201ENST00000413684 1047 ntBASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXN4Q96NZ1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXN4Q96NZ1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms