Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 AC233263.1-201ENST00000578059 224 ntBASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN4Q96NY8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NECTIN4Q96NY8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NECTIN4Q96NY8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 KRT17P2-201ENST00000300992 1314 ntBASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NECTIN4Q96NY8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 AC233702.5-201ENST00000584107 538 ntBASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 AC010331.1-201ENST00000611423 582 ntBASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN4Q96NY8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 BX088651.1-201ENST00000540551 451 ntBASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN4Q96NY8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 AC007322.3-201ENST00000426526 701 ntBASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 AP001412.1-201ENST00000608405 714 ntBASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NECTIN4Q96NY8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN4Q96NY8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN4Q96NY8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN4Q96NY8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN4Q96NY8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN4Q96NY8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN4Q96NY8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.66■■□□□ 1.06
NECTIN4Q96NY8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.66■■□□□ 1.06
NECTIN4Q96NY8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN4Q96NY8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 RPS2P55-201ENST00000397318 883 ntBASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 AC107956.1-201ENST00000494359 873 ntBASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.65■■□□□ 1.06
NECTIN4Q96NY8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms