Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 AL512631.2-201ENST00000604634 923 ntBASIC19.62■□□□□ 0.73
NMD3Q96D46 AC009086.3-201ENST00000623486 1008 ntBASIC19.62■□□□□ 0.73
NMD3Q96D46 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NMD3Q96D46 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NMD3Q96D46 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NMD3Q96D46 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NMD3Q96D46 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.62■□□□□ 0.73
NMD3Q96D46 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.62■□□□□ 0.73
NMD3Q96D46 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NMD3Q96D46 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
NMD3Q96D46 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NMD3Q96D46 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NMD3Q96D46 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NMD3Q96D46 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NMD3Q96D46 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
NMD3Q96D46 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NMD3Q96D46 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NMD3Q96D46 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.61■□□□□ 0.73
NMD3Q96D46 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NMD3Q96D46 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.61■□□□□ 0.73
NMD3Q96D46 AL499627.2-201ENST00000606283 725 ntBASIC19.61■□□□□ 0.73
NMD3Q96D46 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.61■□□□□ 0.73
NMD3Q96D46 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NMD3Q96D46 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NMD3Q96D46 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NMD3Q96D46 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
NMD3Q96D46 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NMD3Q96D46 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NMD3Q96D46 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NMD3Q96D46 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.61■□□□□ 0.73
NMD3Q96D46 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 SMG8-203ENST00000578922 2178 ntBASIC19.6■□□□□ 0.73
NMD3Q96D46 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.6■□□□□ 0.73
NMD3Q96D46 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.6■□□□□ 0.73
NMD3Q96D46 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.6■□□□□ 0.73
NMD3Q96D46 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.6■□□□□ 0.73
NMD3Q96D46 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NMD3Q96D46 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.6■□□□□ 0.73
NMD3Q96D46 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.6■□□□□ 0.73
NMD3Q96D46 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NMD3Q96D46 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.6■□□□□ 0.73
NMD3Q96D46 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NMD3Q96D46 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.6■□□□□ 0.73
NMD3Q96D46 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NMD3Q96D46 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NMD3Q96D46 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NMD3Q96D46 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
NMD3Q96D46 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NMD3Q96D46 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NMD3Q96D46 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NMD3Q96D46 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NMD3Q96D46 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NMD3Q96D46 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NMD3Q96D46 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.59■□□□□ 0.73
NMD3Q96D46 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.59■□□□□ 0.73
NMD3Q96D46 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.59■□□□□ 0.73
NMD3Q96D46 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NMD3Q96D46 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.59■□□□□ 0.73
NMD3Q96D46 AC241377.3-202ENST00000626088 1088 ntBASIC19.59■□□□□ 0.73
NMD3Q96D46 AC241585.3-202ENST00000628937 1088 ntBASIC19.59■□□□□ 0.73
NMD3Q96D46 AC245100.8-202ENST00000629247 1058 ntBASIC19.59■□□□□ 0.73
NMD3Q96D46 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NMD3Q96D46 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NMD3Q96D46 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NMD3Q96D46 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
NMD3Q96D46 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.59■□□□□ 0.73
NMD3Q96D46 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.59■□□□□ 0.73
NMD3Q96D46 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.59■□□□□ 0.73
NMD3Q96D46 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NMD3Q96D46 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NMD3Q96D46 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NMD3Q96D46 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
NMD3Q96D46 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NMD3Q96D46 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.58■□□□□ 0.73
NMD3Q96D46 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NMD3Q96D46 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.58■□□□□ 0.73
NMD3Q96D46 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NMD3Q96D46 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.58■□□□□ 0.73
NMD3Q96D46 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NMD3Q96D46 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.58■□□□□ 0.72
NMD3Q96D46 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.58■□□□□ 0.72
NMD3Q96D46 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NMD3Q96D46 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NMD3Q96D46 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NMD3Q96D46 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NMD3Q96D46 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.58■□□□□ 0.72
NMD3Q96D46 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NMD3Q96D46 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NMD3Q96D46 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NMD3Q96D46 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NMD3Q96D46 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms