Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 AC106739.1-201ENST00000617035 715 ntBASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
FOXRED1Q96CU9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 RNF165-205ENST00000588679 2904 ntBASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 SERBP1P1-201ENST00000396021 1160 ntBASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 PBX2P1-201ENST00000493219 1291 ntBASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FOXRED1Q96CU9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 PLK5-205ENST00000642079 1969 ntBASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXRED1Q96CU9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 AC024257.2-201ENST00000549699 147 ntBASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 AC121338.2-201ENST00000622535 1744 ntBASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXRED1Q96CU9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 EDA-201ENST00000338901 1233 ntBASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 SLC47A1P1-202ENST00000449666 945 ntBASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXRED1Q96CU9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXRED1Q96CU9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms