Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.89■■□□□ 1.89
ZNF428Q96B54 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZNF428Q96B54 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ZNF428Q96B54 AC007375.3-201ENST00000600936 2314 ntBASIC26.88■■□□□ 1.89
ZNF428Q96B54 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
ZNF428Q96B54 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ZNF428Q96B54 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.88■■□□□ 1.89
ZNF428Q96B54 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.88■■□□□ 1.89
ZNF428Q96B54 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.88■■□□□ 1.89
ZNF428Q96B54 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.88■■□□□ 1.89
ZNF428Q96B54 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZNF428Q96B54 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.88■■□□□ 1.89
ZNF428Q96B54 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZNF428Q96B54 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF428Q96B54 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF428Q96B54 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF428Q96B54 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF428Q96B54 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.87■■□□□ 1.89
ZNF428Q96B54 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF428Q96B54 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZNF428Q96B54 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.87■■□□□ 1.89
ZNF428Q96B54 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
ZNF428Q96B54 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
ZNF428Q96B54 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
ZNF428Q96B54 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF428Q96B54 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF428Q96B54 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
ZNF428Q96B54 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
ZNF428Q96B54 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF428Q96B54 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF428Q96B54 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.86■■□□□ 1.89
ZNF428Q96B54 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF428Q96B54 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.86■■□□□ 1.89
ZNF428Q96B54 CLDN5-201ENST00000403084 2357 ntBASIC26.86■■□□□ 1.89
ZNF428Q96B54 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF428Q96B54 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
ZNF428Q96B54 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZNF428Q96B54 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZNF428Q96B54 GPX1P1-201ENST00000388829 606 ntBASIC26.85■■□□□ 1.89
ZNF428Q96B54 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ZNF428Q96B54 CNN2P6-201ENST00000439038 900 ntBASIC26.85■■□□□ 1.89
ZNF428Q96B54 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.85■■□□□ 1.89
ZNF428Q96B54 AC083906.2-201ENST00000511578 360 ntBASIC26.85■■□□□ 1.89
ZNF428Q96B54 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
ZNF428Q96B54 AC005181.1-201ENST00000604782 1256 ntBASIC26.85■■□□□ 1.89
ZNF428Q96B54 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZNF428Q96B54 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ZNF428Q96B54 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
ZNF428Q96B54 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZNF428Q96B54 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
ZNF428Q96B54 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZNF428Q96B54 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZNF428Q96B54 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.84■■□□□ 1.89
ZNF428Q96B54 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.84■■□□□ 1.89
ZNF428Q96B54 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ZNF428Q96B54 AL138781.1-201ENST00000566567 1274 ntBASIC26.84■■□□□ 1.89
ZNF428Q96B54 AC243732.1-201ENST00000612648 864 ntBASIC26.84■■□□□ 1.89
ZNF428Q96B54 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ZNF428Q96B54 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC26.84■■□□□ 1.89
ZNF428Q96B54 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
ZNF428Q96B54 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZNF428Q96B54 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZNF428Q96B54 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
ZNF428Q96B54 AC007322.1-201ENST00000426983 750 ntBASIC26.83■■□□□ 1.89
ZNF428Q96B54 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.83■■□□□ 1.89
ZNF428Q96B54 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.83■■□□□ 1.89
ZNF428Q96B54 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.83■■□□□ 1.89
ZNF428Q96B54 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZNF428Q96B54 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
ZNF428Q96B54 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
ZNF428Q96B54 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZNF428Q96B54 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZNF428Q96B54 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.82■■□□□ 1.88
ZNF428Q96B54 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZNF428Q96B54 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
ZNF428Q96B54 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZNF428Q96B54 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.82■■□□□ 1.88
ZNF428Q96B54 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.82■■□□□ 1.88
ZNF428Q96B54 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
ZNF428Q96B54 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.82■■□□□ 1.88
ZNF428Q96B54 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.82■■□□□ 1.88
ZNF428Q96B54 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZNF428Q96B54 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZNF428Q96B54 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZNF428Q96B54 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF428Q96B54 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF428Q96B54 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
ZNF428Q96B54 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF428Q96B54 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF428Q96B54 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC26.81■■□□□ 1.88
ZNF428Q96B54 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
ZNF428Q96B54 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.81■■□□□ 1.88
ZNF428Q96B54 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF428Q96B54 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.81■■□□□ 1.88
ZNF428Q96B54 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZNF428Q96B54 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.81■■□□□ 1.88
ZNF428Q96B54 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ZNF428Q96B54 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ZNF428Q96B54 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.8■■□□□ 1.88
ZNF428Q96B54 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms