Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.05■□□□□ 0.48
APOBEC3DQ96AK3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
APOBEC3DQ96AK3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOBEC3DQ96AK3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOBEC3DQ96AK3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.04■□□□□ 0.48
APOBEC3DQ96AK3 AC026271.2-201ENST00000428091 497 ntBASIC18.04■□□□□ 0.48
APOBEC3DQ96AK3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
APOBEC3DQ96AK3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
APOBEC3DQ96AK3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOBEC3DQ96AK3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOBEC3DQ96AK3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
APOBEC3DQ96AK3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APOBEC3DQ96AK3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 AC245052.3-201ENST00000450182 901 ntBASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOBEC3DQ96AK3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.02■□□□□ 0.47
APOBEC3DQ96AK3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
APOBEC3DQ96AK3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
APOBEC3DQ96AK3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
APOBEC3DQ96AK3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
APOBEC3DQ96AK3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
APOBEC3DQ96AK3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 SLC7A5P2-201ENST00000553010 536 ntBASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
APOBEC3DQ96AK3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 SLC7A5P1-201ENST00000568957 537 ntBASIC18■□□□□ 0.47
APOBEC3DQ96AK3 KRT18P61-201ENST00000585825 1298 ntBASIC18■□□□□ 0.47
APOBEC3DQ96AK3 MIR5787-201ENST00000611784 55 ntBASIC18■□□□□ 0.47
APOBEC3DQ96AK3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18■□□□□ 0.47
APOBEC3DQ96AK3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18■□□□□ 0.47
APOBEC3DQ96AK3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms