Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.01■□□□□ 0.95
CDKL2Q92772 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
CDKL2Q92772 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL2Q92772 AC027682.1-201ENST00000562846 899 ntBASIC21.01■□□□□ 0.95
CDKL2Q92772 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.01■□□□□ 0.95
CDKL2Q92772 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CDKL2Q92772 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.01■□□□□ 0.95
CDKL2Q92772 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.01■□□□□ 0.95
CDKL2Q92772 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CDKL2Q92772 PLK5-205ENST00000642079 1969 ntBASIC21.01■□□□□ 0.95
CDKL2Q92772 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CDKL2Q92772 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL2Q92772 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.01■□□□□ 0.95
CDKL2Q92772 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDKL2Q92772 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CDKL2Q92772 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21■□□□□ 0.95
CDKL2Q92772 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21■□□□□ 0.95
CDKL2Q92772 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21■□□□□ 0.95
CDKL2Q92772 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDKL2Q92772 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDKL2Q92772 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21■□□□□ 0.95
CDKL2Q92772 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21■□□□□ 0.95
CDKL2Q92772 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21■□□□□ 0.95
CDKL2Q92772 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDKL2Q92772 AC099791.1-201ENST00000416440 715 ntBASIC21■□□□□ 0.95
CDKL2Q92772 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21■□□□□ 0.95
CDKL2Q92772 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CDKL2Q92772 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL2Q92772 AC131212.1-201ENST00000613771 668 ntBASIC21■□□□□ 0.95
CDKL2Q92772 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21■□□□□ 0.95
CDKL2Q92772 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDKL2Q92772 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL2Q92772 TSPY26P-201ENST00000476365 1326 ntBASIC21■□□□□ 0.95
CDKL2Q92772 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDKL2Q92772 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL2Q92772 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CDKL2Q92772 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL2Q92772 AC121338.2-201ENST00000622535 1744 ntBASIC20.99■□□□□ 0.95
CDKL2Q92772 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.99■□□□□ 0.95
CDKL2Q92772 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.99■□□□□ 0.95
CDKL2Q92772 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.99■□□□□ 0.95
CDKL2Q92772 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.99■□□□□ 0.95
CDKL2Q92772 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL2Q92772 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.99■□□□□ 0.95
CDKL2Q92772 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CDKL2Q92772 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.99■□□□□ 0.95
CDKL2Q92772 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL2Q92772 BX005040.4-201ENST00000637145 1518 ntBASIC20.99■□□□□ 0.95
CDKL2Q92772 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDKL2Q92772 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CDKL2Q92772 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDKL2Q92772 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL2Q92772 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL2Q92772 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.98■□□□□ 0.95
CDKL2Q92772 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CDKL2Q92772 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL2Q92772 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
CDKL2Q92772 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL2Q92772 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL2Q92772 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL2Q92772 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL2Q92772 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDKL2Q92772 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL2Q92772 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CDKL2Q92772 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CDKL2Q92772 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL2Q92772 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.97■□□□□ 0.95
CDKL2Q92772 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.97■□□□□ 0.95
CDKL2Q92772 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL2Q92772 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.97■□□□□ 0.95
CDKL2Q92772 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.97■□□□□ 0.95
CDKL2Q92772 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDKL2Q92772 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL2Q92772 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL2Q92772 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL2Q92772 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDKL2Q92772 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL2Q92772 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKL2Q92772 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKL2Q92772 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CDKL2Q92772 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKL2Q92772 GABARAPL3-202ENST00000624044 1851 ntBASIC20.96■□□□□ 0.95
CDKL2Q92772 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.96■□□□□ 0.95
CDKL2Q92772 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CDKL2Q92772 AC008406.3-201ENST00000620001 1374 ntBASIC20.96■□□□□ 0.95
CDKL2Q92772 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDKL2Q92772 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
CDKL2Q92772 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL2Q92772 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL2Q92772 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.95■□□□□ 0.94
CDKL2Q92772 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 PBX2P1-201ENST00000493219 1291 ntBASIC20.95■□□□□ 0.94
CDKL2Q92772 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.95■□□□□ 0.94
CDKL2Q92772 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.95■□□□□ 0.94
CDKL2Q92772 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms