Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 LONRF2P2-201ENST00000439212 571 ntBASIC14.12□□□□□ -0.15
COPS9Q8WXC6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS9Q8WXC6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 BX323043.1-201ENST00000641006 1765 ntBASIC14.11□□□□□ -0.15
COPS9Q8WXC6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.11□□□□□ -0.15
COPS9Q8WXC6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 DUX4L4-201ENST00000566884 1269 ntBASIC14.11□□□□□ -0.15
COPS9Q8WXC6 AC020763.4-201ENST00000623414 4170 ntBASIC14.11□□□□□ -0.15
COPS9Q8WXC6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.11□□□□□ -0.15
COPS9Q8WXC6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 AL592293.1-201ENST00000502889 1188 ntBASIC14.1□□□□□ -0.15
COPS9Q8WXC6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 AC016575.1-201ENST00000607026 382 ntBASIC14.1□□□□□ -0.15
COPS9Q8WXC6 MIR6765-201ENST00000614092 87 ntBASIC14.1□□□□□ -0.15
COPS9Q8WXC6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 AC006128.1-201ENST00000624704 1661 ntBASIC14.1□□□□□ -0.15
COPS9Q8WXC6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COPS9Q8WXC6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COPS9Q8WXC6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
COPS9Q8WXC6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.08□□□□□ -0.15
COPS9Q8WXC6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
COPS9Q8WXC6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms