Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MBD3L1Q8WWY6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MBD3L1Q8WWY6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.36■□□□□ 0.21
MBD3L1Q8WWY6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.36■□□□□ 0.21
MBD3L1Q8WWY6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MBD3L1Q8WWY6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MBD3L1Q8WWY6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 U85056.1-201ENST00000616429 682 ntBASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 AC068587.7-201ENST00000641602 218 ntBASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.34■□□□□ 0.21
MBD3L1Q8WWY6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
MBD3L1Q8WWY6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
MBD3L1Q8WWY6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.33■□□□□ 0.21
MBD3L1Q8WWY6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MBD3L1Q8WWY6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
MBD3L1Q8WWY6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 TNXA-203ENST00000507684 2038 ntBASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MBD3L1Q8WWY6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 KRT18P60-201ENST00000312876 1297 ntBASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 AC074183.2-201ENST00000623112 922 ntBASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.32■□□□□ 0.2
MBD3L1Q8WWY6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 MIR4449-201ENST00000578365 66 ntBASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 PVT1_1.1-201ENST00000615125 194 ntBASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms