Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 AL136967.2-201ENST00000623968 743 ntBASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4IP1Q8WWV3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 SUDS3P1-201ENST00000505831 966 ntBASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4IP1Q8WWV3 TSPY26P-201ENST00000476365 1326 ntBASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 AC142381.2-201ENST00000566120 298 ntBASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 AL034346.1-201ENST00000568244 1277 ntBASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4IP1Q8WWV3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.46■□□□□ 0.39
RTN4IP1Q8WWV3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RTN4IP1Q8WWV3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RTN4IP1Q8WWV3 GABARAPL3-202ENST00000624044 1851 ntBASIC17.46■□□□□ 0.38
RTN4IP1Q8WWV3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RTN4IP1Q8WWV3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RTN4IP1Q8WWV3 AC003102.1-202ENST00000563394 1796 ntBASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RTN4IP1Q8WWV3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms