Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
HIPK4Q8NE63 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HIPK4Q8NE63 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK4Q8NE63 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK4Q8NE63 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK4Q8NE63 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK4Q8NE63 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK4Q8NE63 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.14■□□□□ 0.81
HIPK4Q8NE63 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HIPK4Q8NE63 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK4Q8NE63 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIPK4Q8NE63 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIPK4Q8NE63 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 AL356740.2-201ENST00000601559 647 ntBASIC20.12■□□□□ 0.81
HIPK4Q8NE63 AC099791.2-201ENST00000605725 427 ntBASIC20.12■□□□□ 0.81
HIPK4Q8NE63 AC068587.7-201ENST00000641602 218 ntBASIC20.12■□□□□ 0.81
HIPK4Q8NE63 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
HIPK4Q8NE63 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 OR7E47P-201ENST00000546390 1422 ntBASIC20.11■□□□□ 0.81
HIPK4Q8NE63 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 AC112907.3-201ENST00000577781 2400 ntBASIC20.11■□□□□ 0.81
HIPK4Q8NE63 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.11■□□□□ 0.81
HIPK4Q8NE63 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIPK4Q8NE63 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms