Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPEB3Q8NE35 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPEB3Q8NE35 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.21■□□□□ 0.51
CPEB3Q8NE35 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPEB3Q8NE35 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 KRT18P20-201ENST00000548986 1279 ntBASIC18.2■□□□□ 0.5
CPEB3Q8NE35 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPEB3Q8NE35 AL049796.1-201ENST00000565336 1766 ntBASIC18.19■□□□□ 0.5
CPEB3Q8NE35 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 KRT16P2-201ENST00000414673 1423 ntBASIC18.19■□□□□ 0.5
CPEB3Q8NE35 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 AC120498.10-201ENST00000621827 505 ntBASIC18.19■□□□□ 0.5
CPEB3Q8NE35 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPEB3Q8NE35 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPEB3Q8NE35 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms