Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 AC073912.3-201ENST00000624414 853 ntBASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 LINC01960-201ENST00000563759 1884 ntBASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF248Q8NDW4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 FAM197Y4-202ENST00000622692 608 ntBASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZNF248Q8NDW4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 AC233723.2-201ENST00000623798 2106 ntBASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 MIR4497-201ENST00000583208 89 ntBASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 KRT16P2-201ENST00000414673 1423 ntBASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 RBM17P2-201ENST00000616397 1405 ntBASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.9■□□□□ 0.78
ZNF248Q8NDW4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 MIR1224-201ENST00000408193 85 ntBASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF248Q8NDW4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF248Q8NDW4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 ECEL1P3-201ENST00000427961 737 ntBASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 AC243732.1-201ENST00000612648 864 ntBASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms