Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC168Q8NDH2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 MIR6786-201ENST00000616843 113 ntBASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CCDC168Q8NDH2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC168Q8NDH2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC168Q8NDH2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CCDC168Q8NDH2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
CCDC168Q8NDH2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC168Q8NDH2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC168Q8NDH2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 MCRIP2P1-201ENST00000394346 511 ntBASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC168Q8NDH2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 AC113410.3-201ENST00000623366 203 ntBASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC168Q8NDH2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC168Q8NDH2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC168Q8NDH2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms