Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 TERF1P5-201ENST00000477545 1207 ntBASIC23.6■■□□□ 1.37
RETREG2Q8NC44 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 EEF1DP3-203ENST00000566025 782 ntBASIC23.6■■□□□ 1.37
RETREG2Q8NC44 AC053503.5-201ENST00000601508 636 ntBASIC23.6■■□□□ 1.37
RETREG2Q8NC44 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.6■■□□□ 1.37
RETREG2Q8NC44 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 SLC7A5P1-201ENST00000568957 537 ntBASIC23.59■■□□□ 1.37
RETREG2Q8NC44 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RETREG2Q8NC44 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RETREG2Q8NC44 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RETREG2Q8NC44 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RETREG2Q8NC44 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
RETREG2Q8NC44 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.58■■□□□ 1.37
RETREG2Q8NC44 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
RETREG2Q8NC44 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
RETREG2Q8NC44 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RETREG2Q8NC44 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 AC098934.4-201ENST00000564127 592 ntBASIC23.57■■□□□ 1.36
RETREG2Q8NC44 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RETREG2Q8NC44 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.56■■□□□ 1.36
RETREG2Q8NC44 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 POU5F1P3-201ENST00000428824 1078 ntBASIC23.55■■□□□ 1.36
RETREG2Q8NC44 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RETREG2Q8NC44 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 MKRN4P-201ENST00000444706 1521 ntBASIC23.54■■□□□ 1.36
RETREG2Q8NC44 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 AC068338.2-201ENST00000563278 1430 ntBASIC23.54■■□□□ 1.36
RETREG2Q8NC44 MIPEPP3-201ENST00000412105 444 ntBASIC23.54■■□□□ 1.36
RETREG2Q8NC44 RNA5SP413-201ENST00000516373 109 ntBASIC23.54■■□□□ 1.36
RETREG2Q8NC44 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 AC008694.1-202ENST00000636953 945 ntBASIC23.54■■□□□ 1.36
RETREG2Q8NC44 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms