Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.36■■□□□ 1.01
PAF1Q8N7H5 AP001160.3-201ENST00000601484 763 ntBASIC21.36■■□□□ 1.01
PAF1Q8N7H5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
PAF1Q8N7H5 AC008175.2-201ENST00000612840 297 ntBASIC21.36■■□□□ 1.01
PAF1Q8N7H5 AC120498.10-201ENST00000621827 505 ntBASIC21.36■■□□□ 1.01
PAF1Q8N7H5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
PAF1Q8N7H5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PAF1Q8N7H5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.36■■□□□ 1.01
PAF1Q8N7H5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PAF1Q8N7H5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 AC053503.5-201ENST00000601508 636 ntBASIC21.34■■□□□ 1.01
PAF1Q8N7H5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PAF1Q8N7H5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PAF1Q8N7H5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
PAF1Q8N7H5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.33■■□□□ 1
PAF1Q8N7H5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.33■■□□□ 1
PAF1Q8N7H5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.33■■□□□ 1
PAF1Q8N7H5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.33■■□□□ 1
PAF1Q8N7H5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.32■■□□□ 1
PAF1Q8N7H5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.32■■□□□ 1
PAF1Q8N7H5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PAF1Q8N7H5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.32■■□□□ 1
PAF1Q8N7H5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PAF1Q8N7H5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PAF1Q8N7H5 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.32■■□□□ 1
PAF1Q8N7H5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PAF1Q8N7H5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.31■■□□□ 1
PAF1Q8N7H5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC21.31■■□□□ 1
PAF1Q8N7H5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.31■■□□□ 1
PAF1Q8N7H5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.31■■□□□ 1
PAF1Q8N7H5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.31■■□□□ 1
PAF1Q8N7H5 AC138907.5-202ENST00000569484 235 ntBASIC21.31■■□□□ 1
PAF1Q8N7H5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.31■■□□□ 1
PAF1Q8N7H5 IKBKGP1-201ENST00000612193 1073 ntBASIC21.31■■□□□ 1
PAF1Q8N7H5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PAF1Q8N7H5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PAF1Q8N7H5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PAF1Q8N7H5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PAF1Q8N7H5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms