Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PROM2Q8N271 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
PROM2Q8N271 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.91■■□□□ 1.9
PROM2Q8N271 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PROM2Q8N271 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PROM2Q8N271 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC26.91■■□□□ 1.9
PROM2Q8N271 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PROM2Q8N271 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PROM2Q8N271 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
PROM2Q8N271 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PROM2Q8N271 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PROM2Q8N271 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PROM2Q8N271 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PROM2Q8N271 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PROM2Q8N271 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PROM2Q8N271 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.9■■□□□ 1.9
PROM2Q8N271 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
PROM2Q8N271 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.9■■□□□ 1.9
PROM2Q8N271 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PROM2Q8N271 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PROM2Q8N271 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
PROM2Q8N271 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.9■■□□□ 1.9
PROM2Q8N271 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.9■■□□□ 1.9
PROM2Q8N271 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PROM2Q8N271 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PROM2Q8N271 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PROM2Q8N271 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
PROM2Q8N271 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
PROM2Q8N271 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC26.89■■□□□ 1.9
PROM2Q8N271 CDV3P1-201ENST00000471403 739 ntBASIC26.89■■□□□ 1.9
PROM2Q8N271 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
PROM2Q8N271 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.89■■□□□ 1.9
PROM2Q8N271 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC26.89■■□□□ 1.9
PROM2Q8N271 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.89■■□□□ 1.9
PROM2Q8N271 WDR88-203ENST00000592765 651 ntTSL 5 BASIC26.89■■□□□ 1.9
PROM2Q8N271 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
PROM2Q8N271 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.89■■□□□ 1.9
PROM2Q8N271 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
PROM2Q8N271 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.89■■□□□ 1.9
PROM2Q8N271 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.89■■□□□ 1.89
PROM2Q8N271 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PROM2Q8N271 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.89
PROM2Q8N271 ANOS2P-203ENST00000472227 1816 ntBASIC26.88■■□□□ 1.89
PROM2Q8N271 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
PROM2Q8N271 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
PROM2Q8N271 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
PROM2Q8N271 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PROM2Q8N271 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.88■■□□□ 1.89
PROM2Q8N271 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PROM2Q8N271 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.88■■□□□ 1.89
PROM2Q8N271 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC26.88■■□□□ 1.89
PROM2Q8N271 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PROM2Q8N271 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.88■■□□□ 1.89
PROM2Q8N271 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.88■■□□□ 1.89
PROM2Q8N271 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PROM2Q8N271 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PROM2Q8N271 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PROM2Q8N271 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.87■■□□□ 1.89
PROM2Q8N271 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PROM2Q8N271 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PROM2Q8N271 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PROM2Q8N271 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.87■■□□□ 1.89
PROM2Q8N271 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC26.87■■□□□ 1.89
PROM2Q8N271 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.87■■□□□ 1.89
PROM2Q8N271 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
PROM2Q8N271 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
PROM2Q8N271 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC26.87■■□□□ 1.89
PROM2Q8N271 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PROM2Q8N271 AL135905.2-201ENST00000584934 1404 ntBASIC26.87■■□□□ 1.89
PROM2Q8N271 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PROM2Q8N271 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.86■■□□□ 1.89
PROM2Q8N271 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PROM2Q8N271 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PROM2Q8N271 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PROM2Q8N271 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PROM2Q8N271 TPM1-226ENST00000560959 925 ntTSL 2 BASIC26.86■■□□□ 1.89
PROM2Q8N271 AC110285.5-201ENST00000611501 352 ntBASIC26.86■■□□□ 1.89
PROM2Q8N271 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
PROM2Q8N271 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
PROM2Q8N271 AC092068.2-201ENST00000590491 1708 ntBASIC26.85■■□□□ 1.89
PROM2Q8N271 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
PROM2Q8N271 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PROM2Q8N271 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PROM2Q8N271 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PROM2Q8N271 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
PROM2Q8N271 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.85■■□□□ 1.89
PROM2Q8N271 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC26.85■■□□□ 1.89
PROM2Q8N271 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PROM2Q8N271 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC26.85■■□□□ 1.89
PROM2Q8N271 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.85■■□□□ 1.89
PROM2Q8N271 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PROM2Q8N271 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PROM2Q8N271 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.84■■□□□ 1.89
PROM2Q8N271 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.84■■□□□ 1.89
PROM2Q8N271 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
PROM2Q8N271 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.84■■□□□ 1.89
PROM2Q8N271 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PROM2Q8N271 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PROM2Q8N271 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.84■■□□□ 1.89
PROM2Q8N271 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms