Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML4Q8N228 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.77■■□□□ 1.07
SCML4Q8N228 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SCML4Q8N228 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
SCML4Q8N228 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCML4Q8N228 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.76■■□□□ 1.07
SCML4Q8N228 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SCML4Q8N228 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.76■■□□□ 1.07
SCML4Q8N228 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCML4Q8N228 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.76■■□□□ 1.07
SCML4Q8N228 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.76■■□□□ 1.07
SCML4Q8N228 AC005181.1-201ENST00000604782 1256 ntBASIC21.76■■□□□ 1.07
SCML4Q8N228 FAM21FP-204ENST00000608637 956 ntBASIC21.76■■□□□ 1.07
SCML4Q8N228 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.76■■□□□ 1.07
SCML4Q8N228 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCML4Q8N228 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCML4Q8N228 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCML4Q8N228 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.76■■□□□ 1.07
SCML4Q8N228 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.75■■□□□ 1.07
SCML4Q8N228 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SCML4Q8N228 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.75■■□□□ 1.07
SCML4Q8N228 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.75■■□□□ 1.07
SCML4Q8N228 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.75■■□□□ 1.07
SCML4Q8N228 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.75■■□□□ 1.07
SCML4Q8N228 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SCML4Q8N228 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.75■■□□□ 1.07
SCML4Q8N228 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCML4Q8N228 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
SCML4Q8N228 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SCML4Q8N228 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCML4Q8N228 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCML4Q8N228 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCML4Q8N228 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.74■■□□□ 1.07
SCML4Q8N228 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.74■■□□□ 1.07
SCML4Q8N228 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCML4Q8N228 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.74■■□□□ 1.07
SCML4Q8N228 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.74■■□□□ 1.07
SCML4Q8N228 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.74■■□□□ 1.07
SCML4Q8N228 AC133552.2-202ENST00000575694 574 ntBASIC21.74■■□□□ 1.07
SCML4Q8N228 AL050303.2-201ENST00000619798 666 ntBASIC21.74■■□□□ 1.07
SCML4Q8N228 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.74■■□□□ 1.07
SCML4Q8N228 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SCML4Q8N228 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCML4Q8N228 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCML4Q8N228 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCML4Q8N228 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCML4Q8N228 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SCML4Q8N228 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCML4Q8N228 FEM1AP4-201ENST00000443167 1987 ntBASIC21.74■■□□□ 1.07
SCML4Q8N228 AL049796.1-201ENST00000565336 1766 ntBASIC21.74■■□□□ 1.07
SCML4Q8N228 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCML4Q8N228 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML4Q8N228 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCML4Q8N228 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML4Q8N228 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.73■■□□□ 1.07
SCML4Q8N228 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML4Q8N228 CYP2T1P-201ENST00000432607 1285 ntBASIC21.73■■□□□ 1.07
SCML4Q8N228 CDV3P1-201ENST00000471403 739 ntBASIC21.73■■□□□ 1.07
SCML4Q8N228 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SCML4Q8N228 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.73■■□□□ 1.07
SCML4Q8N228 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCML4Q8N228 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.73■■□□□ 1.07
SCML4Q8N228 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.73■■□□□ 1.07
SCML4Q8N228 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML4Q8N228 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML4Q8N228 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML4Q8N228 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCML4Q8N228 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SCML4Q8N228 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SCML4Q8N228 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCML4Q8N228 AL024507.2-201ENST00000606070 2574 ntBASIC21.72■■□□□ 1.07
SCML4Q8N228 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCML4Q8N228 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCML4Q8N228 MIR663A-201ENST00000385250 93 ntBASIC21.72■■□□□ 1.07
SCML4Q8N228 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SCML4Q8N228 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
SCML4Q8N228 NCF1B-203ENST00000435988 1254 ntBASIC21.72■■□□□ 1.07
SCML4Q8N228 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.72■■□□□ 1.07
SCML4Q8N228 OR10C1-204ENST00000622521 1039 ntBASIC21.72■■□□□ 1.07
SCML4Q8N228 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SCML4Q8N228 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.72■■□□□ 1.07
SCML4Q8N228 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCML4Q8N228 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCML4Q8N228 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.71■■□□□ 1.07
SCML4Q8N228 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SCML4Q8N228 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCML4Q8N228 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SCML4Q8N228 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SCML4Q8N228 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms