Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AL049796.1-201ENST00000565336 1766 ntBASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 MIR7108-201ENST00000614319 87 ntBASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 AC120024.1-201ENST00000562672 995 ntBASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CROCCP3Q8IVE0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CROCCP3Q8IVE0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 DUX4L4-201ENST00000566884 1269 ntBASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.84■□□□□ 0.61
CROCCP3Q8IVE0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CROCCP3Q8IVE0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CROCCP3Q8IVE0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CROCCP3Q8IVE0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CROCCP3Q8IVE0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CROCCP3Q8IVE0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CROCCP3Q8IVE0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms