Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.48■□□□□ 0.55
LRRC28Q86X40 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRRC28Q86X40 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRRC28Q86X40 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC28Q86X40 MIR935-201ENST00000401179 91 ntBASIC18.48■□□□□ 0.55
LRRC28Q86X40 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRRC28Q86X40 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRRC28Q86X40 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC28Q86X40 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC28Q86X40 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC28Q86X40 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.48■□□□□ 0.55
LRRC28Q86X40 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC28Q86X40 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRRC28Q86X40 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRRC28Q86X40 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRRC28Q86X40 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRRC28Q86X40 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC28Q86X40 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC28Q86X40 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.47■□□□□ 0.55
LRRC28Q86X40 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC28Q86X40 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC28Q86X40 AC010525.1-201ENST00000585559 441 ntBASIC18.47■□□□□ 0.55
LRRC28Q86X40 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC28Q86X40 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC28Q86X40 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC28Q86X40 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRRC28Q86X40 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC28Q86X40 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC28Q86X40 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC28Q86X40 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC28Q86X40 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC28Q86X40 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC28Q86X40 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC28Q86X40 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC28Q86X40 AP005435.1-201ENST00000529293 1178 ntBASIC18.46■□□□□ 0.55
LRRC28Q86X40 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRRC28Q86X40 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
LRRC28Q86X40 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRRC28Q86X40 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC28Q86X40 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC28Q86X40 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC28Q86X40 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LRRC28Q86X40 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 IRS3P-201ENST00000223076 1006 ntBASIC18.45■□□□□ 0.54
LRRC28Q86X40 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC28Q86X40 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
LRRC28Q86X40 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC28Q86X40 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC28Q86X40 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC28Q86X40 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC28Q86X40 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRC28Q86X40 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LRRC28Q86X40 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC28Q86X40 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC28Q86X40 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC28Q86X40 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LRRC28Q86X40 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC28Q86X40 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC28Q86X40 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC28Q86X40 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LRRC28Q86X40 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC28Q86X40 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC28Q86X40 IGHV3-19-201ENST00000521488 291 ntBASIC18.43■□□□□ 0.54
LRRC28Q86X40 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRC28Q86X40 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC28Q86X40 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC28Q86X40 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC28Q86X40 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
LRRC28Q86X40 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
LRRC28Q86X40 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC28Q86X40 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC28Q86X40 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
LRRC28Q86X40 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC28Q86X40 TSPY26P-201ENST00000476365 1326 ntBASIC18.43■□□□□ 0.54
LRRC28Q86X40 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC28Q86X40 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms