Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
LCA10Q71F78 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC11.19□□□□□ -0.62
LCA10Q71F78 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LCA10Q71F78 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
LCA10Q71F78 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LCA10Q71F78 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC11.19□□□□□ -0.62
LCA10Q71F78 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LCA10Q71F78 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LCA10Q71F78 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
LCA10Q71F78 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LCA10Q71F78 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.19□□□□□ -0.62
LCA10Q71F78 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LCA10Q71F78 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.19□□□□□ -0.62
LCA10Q71F78 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LCA10Q71F78 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC11.19□□□□□ -0.62
LCA10Q71F78 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LCA10Q71F78 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LCA10Q71F78 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
LCA10Q71F78 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC11.18□□□□□ -0.62
LCA10Q71F78 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
LCA10Q71F78 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC11.18□□□□□ -0.62
LCA10Q71F78 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 ALDH1A3-203ENST00000557963 1670 ntBASIC11.18□□□□□ -0.62
LCA10Q71F78 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC11.18□□□□□ -0.62
LCA10Q71F78 EI24-204ENST00000527235 1625 ntTSL 5 BASIC11.18□□□□□ -0.62
LCA10Q71F78 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC11.18□□□□□ -0.62
LCA10Q71F78 AC007613.1-201ENST00000572811 2597 ntBASIC11.18□□□□□ -0.62
LCA10Q71F78 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LCA10Q71F78 LONRF2P2-201ENST00000439212 571 ntBASIC11.18□□□□□ -0.62
LCA10Q71F78 AC011551.1-201ENST00000614101 683 ntBASIC11.18□□□□□ -0.62
LCA10Q71F78 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 COMT-203ENST00000403184 2217 ntTSL 2 BASIC11.18□□□□□ -0.62
LCA10Q71F78 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
LCA10Q71F78 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC11.18□□□□□ -0.62
LCA10Q71F78 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
LCA10Q71F78 ESRRAP2-201ENST00000418437 1549 ntBASIC11.18□□□□□ -0.62
LCA10Q71F78 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC11.18□□□□□ -0.62
LCA10Q71F78 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LCA10Q71F78 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
LCA10Q71F78 TNXA-203ENST00000507684 2038 ntBASIC11.18□□□□□ -0.62
LCA10Q71F78 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
LCA10Q71F78 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LCA10Q71F78 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LCA10Q71F78 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 STK32C-205ENST00000456004 607 ntTSL 2 BASIC11.17□□□□□ -0.62
LCA10Q71F78 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC11.17□□□□□ -0.62
LCA10Q71F78 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC11.17□□□□□ -0.62
LCA10Q71F78 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC11.17□□□□□ -0.62
LCA10Q71F78 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
LCA10Q71F78 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms