Protein–RNA interactions for Protein: Q6ZV50

RFX8, DNA-binding protein RFX8, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX8Q6ZV50 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 AC008175.2-201ENST00000612840 297 ntBASIC21.66■■□□□ 1.06
RFX8Q6ZV50 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RFX8Q6ZV50 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 AP001160.3-201ENST00000601484 763 ntBASIC21.65■■□□□ 1.06
RFX8Q6ZV50 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RFX8Q6ZV50 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.64■■□□□ 1.05
RFX8Q6ZV50 POU5F1P4-201ENST00000413175 1085 ntBASIC21.64■■□□□ 1.05
RFX8Q6ZV50 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RFX8Q6ZV50 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.64■■□□□ 1.05
RFX8Q6ZV50 NTF6G-201ENST00000591094 616 ntBASIC21.64■■□□□ 1.05
RFX8Q6ZV50 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFX8Q6ZV50 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RFX8Q6ZV50 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFX8Q6ZV50 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RFX8Q6ZV50 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.63■■□□□ 1.05
RFX8Q6ZV50 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RFX8Q6ZV50 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 AL049796.1-201ENST00000565336 1766 ntBASIC21.61■■□□□ 1.05
RFX8Q6ZV50 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 KRT19P1-201ENST00000405746 1186 ntBASIC21.61■■□□□ 1.05
RFX8Q6ZV50 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.61■■□□□ 1.05
RFX8Q6ZV50 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.6■■□□□ 1.05
RFX8Q6ZV50 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFX8Q6ZV50 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms