Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC31.41■■■□□ 2.62
CCDC141Q6ZP82 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
CCDC141Q6ZP82 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC141Q6ZP82 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC31.41■■■□□ 2.62
CCDC141Q6ZP82 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC141Q6ZP82 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC141Q6ZP82 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC141Q6ZP82 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC141Q6ZP82 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC31.4■■■□□ 2.62
CCDC141Q6ZP82 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 C1orf229-201ENST00000623686 2258 ntBASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 SOX15-203ENST00000570788 1093 ntBASIC31.39■■■□□ 2.62
CCDC141Q6ZP82 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 KRT18P68-201ENST00000392293 1000 ntBASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 MME-217ENST00000616757 1315 ntTSL 5 BASIC31.38■■■□□ 2.61
CCDC141Q6ZP82 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC141Q6ZP82 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC141Q6ZP82 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC141Q6ZP82 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC141Q6ZP82 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC141Q6ZP82 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC31.37■■■□□ 2.61
CCDC141Q6ZP82 UBE2SP1-201ENST00000450587 669 ntBASIC31.37■■■□□ 2.61
CCDC141Q6ZP82 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC141Q6ZP82 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC31.37■■■□□ 2.61
CCDC141Q6ZP82 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC141Q6ZP82 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC31.36■■■□□ 2.61
CCDC141Q6ZP82 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC141Q6ZP82 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC141Q6ZP82 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC141Q6ZP82 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC141Q6ZP82 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC31.34■■■□□ 2.61
CCDC141Q6ZP82 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC31.34■■■□□ 2.61
CCDC141Q6ZP82 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
CCDC141Q6ZP82 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC141Q6ZP82 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC141Q6ZP82 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC141Q6ZP82 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC141Q6ZP82 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC31.33■■■□□ 2.61
CCDC141Q6ZP82 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC141Q6ZP82 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC31.33■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms