Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDKAL1Q5VV42 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.87■■□□□ 1.25
CDKAL1Q5VV42 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDKAL1Q5VV42 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CDKAL1Q5VV42 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDKAL1Q5VV42 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CDKAL1Q5VV42 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CDKAL1Q5VV42 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 MIR939-201ENST00000401314 82 ntBASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 RASA4CP-201ENST00000424092 1398 ntBASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.86■■□□□ 1.25
CDKAL1Q5VV42 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 AC012414.1-201ENST00000556676 535 ntBASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 AL031432.3-201ENST00000607698 485 ntBASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDKAL1Q5VV42 AC061975.6-201ENST00000579045 1553 ntBASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDKAL1Q5VV42 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.83■■□□□ 1.25
CDKAL1Q5VV42 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.83■■□□□ 1.25
CDKAL1Q5VV42 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
CDKAL1Q5VV42 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDKAL1Q5VV42 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.83■■□□□ 1.25
CDKAL1Q5VV42 AF213884.3-201ENST00000563833 479 ntBASIC22.83■■□□□ 1.25
CDKAL1Q5VV42 TPRG1LP1-201ENST00000598702 760 ntBASIC22.83■■□□□ 1.25
CDKAL1Q5VV42 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
CDKAL1Q5VV42 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDKAL1Q5VV42 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.83■■□□□ 1.24
CDKAL1Q5VV42 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDKAL1Q5VV42 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDKAL1Q5VV42 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDKAL1Q5VV42 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 AC011484.1-201ENST00000377652 1995 ntBASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 AL162377.1-201ENST00000618844 1793 ntBASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 AC110285.6-201ENST00000617652 491 ntBASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 AL355001.2-201ENST00000620617 1191 ntBASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDKAL1Q5VV42 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 AC008406.3-201ENST00000620001 1374 ntBASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.81■■□□□ 1.24
CDKAL1Q5VV42 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms