Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 POM121L13P-201ENST00000422362 380 ntBASIC26.55■■□□□ 1.84
RC3H1Q5TC82 HES2-205ENST00000487437 968 ntTSL 3 BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RC3H1Q5TC82 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 C11orf96-202ENST00000528572 1834 ntBASIC26.54■■□□□ 1.84
RC3H1Q5TC82 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.54■■□□□ 1.84
RC3H1Q5TC82 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 FAM210CP-201ENST00000445714 574 ntBASIC26.53■■□□□ 1.84
RC3H1Q5TC82 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RC3H1Q5TC82 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 CYP21A1P-202ENST00000354927 1481 ntBASIC26.52■■□□□ 1.84
RC3H1Q5TC82 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RC3H1Q5TC82 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.51■■□□□ 1.83
RC3H1Q5TC82 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.5■■□□□ 1.83
RC3H1Q5TC82 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RC3H1Q5TC82 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RC3H1Q5TC82 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RC3H1Q5TC82 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 AC012618.2-201ENST00000428058 849 ntBASIC26.49■■□□□ 1.83
RC3H1Q5TC82 RPS20-210ENST00000523936 899 ntTSL 2 BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.49■■□□□ 1.83
RC3H1Q5TC82 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 AC233702.5-201ENST00000584107 538 ntBASIC26.48■■□□□ 1.83
RC3H1Q5TC82 AC105020.6-201ENST00000621523 1217 ntBASIC26.48■■□□□ 1.83
RC3H1Q5TC82 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RC3H1Q5TC82 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RC3H1Q5TC82 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms