Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 LINC02084-201ENST00000606069 1096 ntBASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL13A1Q5TAT6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 AC120498.8-201ENST00000614275 531 ntBASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 AC139530.3-201ENST00000620344 690 ntBASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL13A1Q5TAT6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 PCED1CP-201ENST00000419887 785 ntBASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 AC128688.1-201ENST00000487626 519 ntBASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL13A1Q5TAT6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
COL13A1Q5TAT6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL13A1Q5TAT6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL13A1Q5TAT6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL13A1Q5TAT6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL13A1Q5TAT6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.89■■□□□ 1.41
COL13A1Q5TAT6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.89■■□□□ 1.41
COL13A1Q5TAT6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.89■■□□□ 1.41
COL13A1Q5TAT6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.89■■□□□ 1.41
COL13A1Q5TAT6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL13A1Q5TAT6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL13A1Q5TAT6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 FITM1-202ENST00000559294 800 ntBASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
COL13A1Q5TAT6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
COL13A1Q5TAT6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.87■■□□□ 1.41
COL13A1Q5TAT6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.87■■□□□ 1.41
COL13A1Q5TAT6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL13A1Q5TAT6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL13A1Q5TAT6 HTR7P1-201ENST00000538670 1336 ntBASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 NUDT16P1-203ENST00000513809 620 ntBASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 FAM21FP-204ENST00000608637 956 ntBASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 CR769767.2-201ENST00000622735 460 ntBASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.86■■□□□ 1.41
COL13A1Q5TAT6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 FAM8A6P-201ENST00000407496 1135 ntBASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
COL13A1Q5TAT6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 KRT18P68-201ENST00000392293 1000 ntBASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 MCRIP2P1-201ENST00000394346 511 ntBASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.84■■□□□ 1.41
COL13A1Q5TAT6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms