Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH2D4BQ5SQS7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 AC011298.3-201ENST00000615796 283 ntBASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D4BQ5SQS7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 AC008406.3-201ENST00000620001 1374 ntBASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.55■□□□□ 0.88
SH2D4BQ5SQS7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4BQ5SQS7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4BQ5SQS7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4BQ5SQS7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SH2D4BQ5SQS7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4BQ5SQS7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4BQ5SQS7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4BQ5SQS7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D4BQ5SQS7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D4BQ5SQS7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D4BQ5SQS7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.52■□□□□ 0.87
SH2D4BQ5SQS7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SH2D4BQ5SQS7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SH2D4BQ5SQS7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SH2D4BQ5SQS7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SH2D4BQ5SQS7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4BQ5SQS7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4BQ5SQS7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SH2D4BQ5SQS7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SH2D4BQ5SQS7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SH2D4BQ5SQS7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D4BQ5SQS7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms