Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.28■□□□□ 0.84
CCSMST1Q4G0I0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 MFSD11-216ENST00000590393 1141 ntBASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCSMST1Q4G0I0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCSMST1Q4G0I0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCSMST1Q4G0I0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 SLC7A5P1-201ENST00000568957 537 ntBASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCSMST1Q4G0I0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 RBM17P2-201ENST00000616397 1405 ntBASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CCSMST1Q4G0I0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 AC004911.1-201ENST00000416316 871 ntBASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCSMST1Q4G0I0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 AC092666.2-201ENST00000613287 246 ntBASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCSMST1Q4G0I0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 KRT18P11-201ENST00000435214 1283 ntBASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 AC010536.3-201ENST00000620306 533 ntBASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms