Protein–RNA interactions for Protein: Q16385

SSX2, Protein SSX2, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2Q16385 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.34■□□□□ 0.37
SSX2Q16385 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.34■□□□□ 0.37
SSX2Q16385 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SSX2Q16385 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.34■□□□□ 0.37
SSX2Q16385 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.34■□□□□ 0.37
SSX2Q16385 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2Q16385 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.34■□□□□ 0.37
SSX2Q16385 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2Q16385 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2Q16385 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SSX2Q16385 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2Q16385 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2Q16385 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSX2Q16385 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.34■□□□□ 0.37
SSX2Q16385 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.33■□□□□ 0.37
SSX2Q16385 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSX2Q16385 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSX2Q16385 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSX2Q16385 AC092053.2-201ENST00000640557 1818 ntBASIC17.33■□□□□ 0.37
SSX2Q16385 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSX2Q16385 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSX2Q16385 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.33■□□□□ 0.36
SSX2Q16385 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSX2Q16385 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSX2Q16385 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.33■□□□□ 0.36
SSX2Q16385 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.33■□□□□ 0.36
SSX2Q16385 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.33■□□□□ 0.36
SSX2Q16385 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.33■□□□□ 0.36
SSX2Q16385 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.33■□□□□ 0.36
SSX2Q16385 AL158211.5-201ENST00000623583 2518 ntBASIC17.33■□□□□ 0.36
SSX2Q16385 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSX2Q16385 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSX2Q16385 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.33■□□□□ 0.36
SSX2Q16385 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSX2Q16385 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSX2Q16385 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.33■□□□□ 0.36
SSX2Q16385 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSX2Q16385 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.32■□□□□ 0.36
SSX2Q16385 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SSX2Q16385 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSX2Q16385 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSX2Q16385 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSX2Q16385 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.32■□□□□ 0.36
SSX2Q16385 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSX2Q16385 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSX2Q16385 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSX2Q16385 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSX2Q16385 AC007952.6-201ENST00000573168 2673 ntBASIC17.32■□□□□ 0.36
SSX2Q16385 AC003957.1-201ENST00000625108 2673 ntBASIC17.32■□□□□ 0.36
SSX2Q16385 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.32■□□□□ 0.36
SSX2Q16385 AL162430.1-201ENST00000480705 870 ntBASIC17.32■□□□□ 0.36
SSX2Q16385 AC079140.4-201ENST00000507448 529 ntBASIC17.32■□□□□ 0.36
SSX2Q16385 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.32■□□□□ 0.36
SSX2Q16385 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSX2Q16385 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.32■□□□□ 0.36
SSX2Q16385 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.32■□□□□ 0.36
SSX2Q16385 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.32■□□□□ 0.36
SSX2Q16385 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSX2Q16385 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SSX2Q16385 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.32■□□□□ 0.36
SSX2Q16385 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SSX2Q16385 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SSX2Q16385 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.31■□□□□ 0.36
SSX2Q16385 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.31■□□□□ 0.36
SSX2Q16385 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SSX2Q16385 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SSX2Q16385 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SSX2Q16385 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.31■□□□□ 0.36
SSX2Q16385 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.31■□□□□ 0.36
SSX2Q16385 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.31■□□□□ 0.36
SSX2Q16385 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSX2Q16385 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2Q16385 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSX2Q16385 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2Q16385 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2Q16385 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2Q16385 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX2Q16385 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX2Q16385 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SSX2Q16385 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX2Q16385 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.3■□□□□ 0.36
SSX2Q16385 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSX2Q16385 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.3■□□□□ 0.36
SSX2Q16385 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms