Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.43■□□□□ 0.7
VLDLRP98155 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 PCDHAC2-203ENST00000615316 3011 ntBASIC19.42■□□□□ 0.7
VLDLRP98155 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VLDLRP98155 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
VLDLRP98155 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.42■□□□□ 0.7
VLDLRP98155 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
VLDLRP98155 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.42■□□□□ 0.7
VLDLRP98155 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.42■□□□□ 0.7
VLDLRP98155 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.42■□□□□ 0.7
VLDLRP98155 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VLDLRP98155 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VLDLRP98155 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
VLDLRP98155 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VLDLRP98155 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.42■□□□□ 0.7
VLDLRP98155 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VLDLRP98155 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VLDLRP98155 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VLDLRP98155 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VLDLRP98155 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VLDLRP98155 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VLDLRP98155 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VLDLRP98155 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VLDLRP98155 PBX2P1-201ENST00000493219 1291 ntBASIC19.41■□□□□ 0.7
VLDLRP98155 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.41■□□□□ 0.7
VLDLRP98155 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.41■□□□□ 0.7
VLDLRP98155 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.41■□□□□ 0.7
VLDLRP98155 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.41■□□□□ 0.7
VLDLRP98155 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VLDLRP98155 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.41■□□□□ 0.7
VLDLRP98155 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.41■□□□□ 0.7
VLDLRP98155 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VLDLRP98155 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VLDLRP98155 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VLDLRP98155 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VLDLRP98155 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
VLDLRP98155 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
VLDLRP98155 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 AC027702.1-201ENST00000563810 1770 ntBASIC19.4■□□□□ 0.7
VLDLRP98155 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.4■□□□□ 0.7
VLDLRP98155 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.4■□□□□ 0.7
VLDLRP98155 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 AC142381.2-201ENST00000566120 298 ntBASIC19.4■□□□□ 0.7
VLDLRP98155 AC011298.3-201ENST00000615796 283 ntBASIC19.4■□□□□ 0.7
VLDLRP98155 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
VLDLRP98155 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.4■□□□□ 0.7
VLDLRP98155 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VLDLRP98155 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VLDLRP98155 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VLDLRP98155 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VLDLRP98155 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.39■□□□□ 0.7
VLDLRP98155 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VLDLRP98155 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
VLDLRP98155 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 SMUG1P1-201ENST00000590640 811 ntBASIC19.39■□□□□ 0.69
VLDLRP98155 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VLDLRP98155 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
VLDLRP98155 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.39■□□□□ 0.69
VLDLRP98155 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VLDLRP98155 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
VLDLRP98155 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VLDLRP98155 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VLDLRP98155 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VLDLRP98155 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.38■□□□□ 0.69
VLDLRP98155 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
VLDLRP98155 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VLDLRP98155 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
VLDLRP98155 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.38■□□□□ 0.69
VLDLRP98155 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
VLDLRP98155 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms