Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC27.4■■□□□ 1.98
RIPK4P57078 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
RIPK4P57078 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RIPK4P57078 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RIPK4P57078 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.4■■□□□ 1.98
RIPK4P57078 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
RIPK4P57078 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.4■■□□□ 1.98
RIPK4P57078 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
RIPK4P57078 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
RIPK4P57078 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC27.4■■□□□ 1.98
RIPK4P57078 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RIPK4P57078 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
RIPK4P57078 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC27.4■■□□□ 1.98
RIPK4P57078 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC27.39■■□□□ 1.98
RIPK4P57078 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RIPK4P57078 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.39■■□□□ 1.98
RIPK4P57078 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RIPK4P57078 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.39■■□□□ 1.98
RIPK4P57078 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.39■■□□□ 1.98
RIPK4P57078 AC006970.2-201ENST00000450065 779 ntBASIC27.39■■□□□ 1.98
RIPK4P57078 AC245052.3-201ENST00000450182 901 ntBASIC27.39■■□□□ 1.98
RIPK4P57078 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.39■■□□□ 1.98
RIPK4P57078 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.39■■□□□ 1.98
RIPK4P57078 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
RIPK4P57078 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC27.39■■□□□ 1.98
RIPK4P57078 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
RIPK4P57078 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RIPK4P57078 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RIPK4P57078 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
RIPK4P57078 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
RIPK4P57078 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
RIPK4P57078 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
RIPK4P57078 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RIPK4P57078 AC091799.1-201ENST00000422823 811 ntBASIC27.38■■□□□ 1.97
RIPK4P57078 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RIPK4P57078 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC27.38■■□□□ 1.97
RIPK4P57078 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RIPK4P57078 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.38■■□□□ 1.97
RIPK4P57078 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
RIPK4P57078 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIPK4P57078 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
RIPK4P57078 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIPK4P57078 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIPK4P57078 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.37■■□□□ 1.97
RIPK4P57078 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RIPK4P57078 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
RIPK4P57078 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC27.37■■□□□ 1.97
RIPK4P57078 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RIPK4P57078 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RIPK4P57078 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RIPK4P57078 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
RIPK4P57078 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
RIPK4P57078 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
RIPK4P57078 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC27.36■■□□□ 1.97
RIPK4P57078 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RIPK4P57078 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RIPK4P57078 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RIPK4P57078 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RIPK4P57078 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC27.35■■□□□ 1.97
RIPK4P57078 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RIPK4P57078 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC27.35■■□□□ 1.97
RIPK4P57078 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.35■■□□□ 1.97
RIPK4P57078 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.35■■□□□ 1.97
RIPK4P57078 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RIPK4P57078 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
RIPK4P57078 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RIPK4P57078 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RIPK4P57078 CLDN5-201ENST00000403084 2357 ntBASIC27.34■■□□□ 1.97
RIPK4P57078 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC27.34■■□□□ 1.97
RIPK4P57078 NCF1B-203ENST00000435988 1254 ntBASIC27.34■■□□□ 1.97
RIPK4P57078 CD44-222ENST00000526025 1052 ntTSL 2 BASIC27.34■■□□□ 1.97
RIPK4P57078 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.34■■□□□ 1.97
RIPK4P57078 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.34■■□□□ 1.97
RIPK4P57078 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.34■■□□□ 1.97
RIPK4P57078 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RIPK4P57078 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC27.33■■□□□ 1.97
RIPK4P57078 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
RIPK4P57078 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RIPK4P57078 AL024507.2-201ENST00000606070 2574 ntBASIC27.33■■□□□ 1.97
RIPK4P57078 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RIPK4P57078 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC27.33■■□□□ 1.97
RIPK4P57078 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RIPK4P57078 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
RIPK4P57078 AL591742.1-201ENST00000604433 565 ntBASIC27.33■■□□□ 1.97
RIPK4P57078 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RIPK4P57078 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RIPK4P57078 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RIPK4P57078 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC27.33■■□□□ 1.97
RIPK4P57078 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK4P57078 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK4P57078 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK4P57078 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK4P57078 CYP2T1P-201ENST00000432607 1285 ntBASIC27.32■■□□□ 1.96
RIPK4P57078 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.32■■□□□ 1.96
RIPK4P57078 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.32■■□□□ 1.96
RIPK4P57078 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK4P57078 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK4P57078 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
RIPK4P57078 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
RIPK4P57078 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms