Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA1P56159 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA1P56159 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
GFRA1P56159 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA1P56159 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA1P56159 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
GFRA1P56159 AL512625.2-201ENST00000417533 625 ntBASIC18.74■□□□□ 0.59
GFRA1P56159 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.74■□□□□ 0.59
GFRA1P56159 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.74■□□□□ 0.59
GFRA1P56159 AC016405.3-201ENST00000607710 860 ntBASIC18.74■□□□□ 0.59
GFRA1P56159 AC008694.1-202ENST00000636953 945 ntBASIC18.74■□□□□ 0.59
GFRA1P56159 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.74■□□□□ 0.59
GFRA1P56159 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GFRA1P56159 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GFRA1P56159 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
GFRA1P56159 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA1P56159 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.73■□□□□ 0.59
GFRA1P56159 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA1P56159 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA1P56159 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA1P56159 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
GFRA1P56159 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.73■□□□□ 0.59
GFRA1P56159 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.73■□□□□ 0.59
GFRA1P56159 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
GFRA1P56159 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.73■□□□□ 0.59
GFRA1P56159 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.73■□□□□ 0.59
GFRA1P56159 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA1P56159 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.73■□□□□ 0.59
GFRA1P56159 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA1P56159 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.73■□□□□ 0.59
GFRA1P56159 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA1P56159 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
GFRA1P56159 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GFRA1P56159 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 RARRES2P4-201ENST00000514074 484 ntBASIC18.72■□□□□ 0.59
GFRA1P56159 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
GFRA1P56159 AC142086.2-201ENST00000569753 217 ntBASIC18.72■□□□□ 0.59
GFRA1P56159 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
GFRA1P56159 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
GFRA1P56159 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.72■□□□□ 0.59
GFRA1P56159 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.72■□□□□ 0.59
GFRA1P56159 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GFRA1P56159 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.72■□□□□ 0.59
GFRA1P56159 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.72■□□□□ 0.59
GFRA1P56159 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA1P56159 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA1P56159 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA1P56159 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.71■□□□□ 0.59
GFRA1P56159 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA1P56159 Z98882.1-201ENST00000622160 2253 ntBASIC18.71■□□□□ 0.59
GFRA1P56159 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GFRA1P56159 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA1P56159 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
GFRA1P56159 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GFRA1P56159 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.71■□□□□ 0.59
GFRA1P56159 AC093787.1-201ENST00000450396 207 ntBASIC18.71■□□□□ 0.59
GFRA1P56159 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.71■□□□□ 0.59
GFRA1P56159 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.71■□□□□ 0.59
GFRA1P56159 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.71■□□□□ 0.59
GFRA1P56159 FAM21FP-204ENST00000608637 956 ntBASIC18.71■□□□□ 0.59
GFRA1P56159 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.71■□□□□ 0.59
GFRA1P56159 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.71■□□□□ 0.59
GFRA1P56159 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.71■□□□□ 0.59
GFRA1P56159 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA1P56159 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GFRA1P56159 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
GFRA1P56159 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.71■□□□□ 0.59
GFRA1P56159 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
GFRA1P56159 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
GFRA1P56159 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA1P56159 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA1P56159 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GFRA1P56159 SLC29A4P1-201ENST00000398760 971 ntBASIC18.7■□□□□ 0.58
GFRA1P56159 AL355802.2-201ENST00000402069 882 ntBASIC18.7■□□□□ 0.58
GFRA1P56159 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA1P56159 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.7■□□□□ 0.58
GFRA1P56159 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.7■□□□□ 0.58
GFRA1P56159 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
GFRA1P56159 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.7■□□□□ 0.58
GFRA1P56159 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.7■□□□□ 0.58
GFRA1P56159 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.7■□□□□ 0.58
GFRA1P56159 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GFRA1P56159 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GFRA1P56159 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GFRA1P56159 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GFRA1P56159 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.69■□□□□ 0.58
GFRA1P56159 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFRA1P56159 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms