Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
HMGA2P52926 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HMGA2P52926 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGA2P52926 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HMGA2P52926 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGA2P52926 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGA2P52926 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGA2P52926 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGA2P52926 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HMGA2P52926 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGA2P52926 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGA2P52926 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.05■□□□□ 0.64
HMGA2P52926 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGA2P52926 AC011484.1-201ENST00000377652 1995 ntBASIC19.04■□□□□ 0.64
HMGA2P52926 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGA2P52926 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGA2P52926 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HMGA2P52926 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGA2P52926 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGA2P52926 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGA2P52926 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGA2P52926 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGA2P52926 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGA2P52926 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HMGA2P52926 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGA2P52926 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HMGA2P52926 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGA2P52926 AL512408.1-201ENST00000569378 2000 ntBASIC19.04■□□□□ 0.64
HMGA2P52926 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.04■□□□□ 0.64
HMGA2P52926 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGA2P52926 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HMGA2P52926 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HMGA2P52926 AC005224.4-201ENST00000583262 1652 ntBASIC19.04■□□□□ 0.64
HMGA2P52926 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGA2P52926 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 AC131281.2-201ENST00000520478 145 ntBASIC19.03■□□□□ 0.64
HMGA2P52926 IGHV3-19-201ENST00000521488 291 ntBASIC19.03■□□□□ 0.64
HMGA2P52926 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HMGA2P52926 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HMGA2P52926 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HMGA2P52926 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HMGA2P52926 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 FP700111.2-201ENST00000619190 1892 ntBASIC19.03■□□□□ 0.64
HMGA2P52926 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGA2P52926 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGA2P52926 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGA2P52926 AC007952.6-201ENST00000573168 2673 ntBASIC19.02■□□□□ 0.64
HMGA2P52926 AC003957.1-201ENST00000625108 2673 ntBASIC19.02■□□□□ 0.64
HMGA2P52926 AL391422.3-201ENST00000603791 2761 ntBASIC19.02■□□□□ 0.64
HMGA2P52926 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGA2P52926 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HMGA2P52926 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.02■□□□□ 0.64
HMGA2P52926 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HMGA2P52926 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGA2P52926 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGA2P52926 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.02■□□□□ 0.64
HMGA2P52926 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.02■□□□□ 0.64
HMGA2P52926 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGA2P52926 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.02■□□□□ 0.64
HMGA2P52926 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HMGA2P52926 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGA2P52926 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.02■□□□□ 0.63
HMGA2P52926 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
HMGA2P52926 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGA2P52926 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGA2P52926 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
HMGA2P52926 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
HMGA2P52926 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGA2P52926 AFG3L1P-217ENST00000557444 2447 ntBASIC19.01■□□□□ 0.63
HMGA2P52926 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGA2P52926 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
HMGA2P52926 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGA2P52926 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGA2P52926 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGA2P52926 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGA2P52926 MIR4767-201ENST00000582827 78 ntBASIC19.01■□□□□ 0.63
HMGA2P52926 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGA2P52926 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HMGA2P52926 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGA2P52926 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGA2P52926 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGA2P52926 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms